Chief Research Scientist

Marit Holden

Publications

  • 206 publications found
  • Publisher

The aerosol pathway is crucial for observationally constraining climate sensitivity and anthropogenic forcing Earth System Dynamics (ESD), vol. 15, pp. 1435 1458 , (ISSN 2190-4979 2190-4987 ), doi: https://doi.org/10.5194/esd-15-1435-2024 , 2024. Scientific article

A two-stage mammography classification model using explainable-AI for ROI detection Nordic Machine Intelligence (NMI), vol. 3, (ISSN 2703-9196 ), doi: https://doi.org/10.5617/nmi.10459 , 2023. Scientific article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

A mammography classification model trained from image labels only Proceedings of the Northern Lights Deep Learning Workshop, (ISSN 2703-6928 ), doi: https://doi.org/10.7557/18.6244 , 2022. Scientific article

Publisher Norsk Regnesentral

Transcriptomic signals in blood prior to lung cancer focusing on time to diagnosis and metastasis Scientific Reports, vol. 11, pp. 1 11 , (ISSN 2045-2322 ), doi: https://doi.org/10.1038/s41598-021-86879-8 , 2021. Scientific article

Distinct subsets of noncoding RNAs are strongly associated with BMD and fracture, studied in weight-bearing and non-weight-bearing human bone Journal of Bone and Mineral Research, vol. 35, pp. 1065 1076 , (ISSN 0884-0431 1523-4681 ), doi: https://doi.org/10.1002/jbmr.3974 , 2020. Scientific article

User-Intended Doppler Measurement Type Prediction Combining CNNs With Smart Post-Processing IEEE Journal of Biomedical and Health Informatics, (ISSN 2168-2194 2168-2208 ), doi: https://doi.org/10.1109/JBHI.2020.3029392 , 2020. Scientific article

Statistics of Sparsely Sampled Curves pp. 95 109 , doi: https://doi.org/10.18261/9788215041193-2020-06 , 2020. Scientific chapter / article / conference article

Eiliv Lund; Marit Holden; Jean-Christophe Thalabard; Lill-Tove Rasmussen Busund; Igor Snapkow; et al. 9. Signals of Death—Post-Diagnostic Single Gene Expression Trajectories in Breast Cancer—A Proof of Concept pp. 141 162 , doi: https://doi.org/10.18261/9788215041193-2020-09 , 2020. Scientific chapter / article / conference article

Automated Left Ventricle Dimension Measurement in 2D Cardiac Ultrasound via an Anatomically Meaningful CNN Approach Lecture Notes in Computer Science (LNCS), vol. 11798 LNCS, pp. 29 37 , (ISSN 0302-9743 1611-3349 ), doi: https://doi.org/10.1007/978-3-030-32875-7_4 , 2019. Scientific article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Climate sensitivity estimates - Sensitivity to radiative forcing time series and observational data Earth System Dynamics (ESD), vol. 9, pp. 879 894 , (ISSN 2190-4979 2190-4987 ), doi: https://doi.org/10.5194/esd-9-879-2018 , 2018. Scientific article

Eiliv Lund; Aurelie Nakamura; Igor Snapkov; Jean-Christophe Thalabard; Karina Standahl Olsen; et al. Each pregnancy linearly changes immune gene expression in the blood of healthy women compared with breast cancer patients. Clinical Epidemiology, (ISSN 1179-1349 1179-1349 ), doi: https://doi.org/10.2147/CLEP.S163208 , 2018. Scientific article

Distinct subsets of non-coding RNAs, including miRNAs, are associated with BMD in stressed and unstressed bone Journal of Bone and Mineral Research, vol. 33, pp. 228 228 , (ISSN 0884-0431 1523-4681 ), , 2018. Abstract

Publisher Norsk Regnesentral

Marit Holden; Lars Holden; Karina Standahl Olsen; Eiliv Lund; Local In Time Statistics for detecting weak gene expression signals in blood – illustrated for prediction of metastases in breast cancer in the NOWAC Post-genome Cohort Advances in Genomics and Genetics, vol. 7, pp. 11 28 , (ISSN 1179-9870 1179-9870 ), doi: https://doi.org/10.2147/AGG.S130004 , 2017. Scientific article

Eiliv Lund; Lars Holden; Hege Bøvelstad; Sandra Caroline Plancade; Nicolle Mode; et al. A new statistical method for curve group analysis of longitudinal gene expression data illustrated for breast cancer in the NOWAC postgenome cohort as a proof of principle BMC Medical Research Methodology, vol. 16, (ISSN 1471-2288 1471-2288 ), doi: https://doi.org/10.1186/s12874-016-0129-z , 2016. Scientific article

Publisher BioMed Central (BMC)
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Multi-focus cluster labeling Journal of Biomedical Informatics, vol. 55, pp. 116 123 , (ISSN 1532-0464 1532-0480 ), doi: https://doi.org/10.1016/j.jbi.2015.03.012 , 2015. Scientific article

Corinna Lau; Ståle Nygård; Hilde Fure; Ole Kristoffer Olstad; Marit Holden; et al. CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray PLOS ONE, vol. 10, pp. 19 , (ISSN 1932-6203 1932-6203 ), doi: https://doi.org/10.1371/journal.pone.0117261 , 2015. Scientific article

Corinna Lau; Ole Kristoffer Olstad; Marit Holden; Ståle Nygård; Hilde Fure; et al. Gene expression profiling of Gram-negative bacteria-induced inflammation in human whole blood: The role of complement and CD14-mediated innate immune response Genomics Data, vol. 5, pp. 176 183 , (ISSN 2213-5960 2213-5960 ), doi: https://doi.org/10.1016/j.gdata.2015.05.019 , 2015. Scientific article

Publisher Elsevier
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

A statistical model of ChIA-PET data for accurate detection of chromatin 3D interactions Nucleic Acids Research (NAR), vol. 42, pp. e143 e143 , (ISSN 0305-1048 1362-4962 ), doi: https://doi.org/10.1093/nar/gku738 , 2014. Scientific article

Mari Myhrstad; Stine Marie Ulven; Clara-Cecilie Günther; Inger Ottestad; Marit Holden; et al. Fish oil supplementation induces Expression of genes related to cell cycle, endoplasmic reticulum stress and apoptosis in peripheral blood mononuclear cells: a transcriptomic approach Journal of Internal Medicine, vol. 276, pp. 498 511 , (ISSN 0954-6820 1365-2796 ), doi: https://doi.org/10.1111/joim.12217 , 2014. Scientific article

Evaluation of Binary Descriptors for Fast and Fully Automatic Identification International Conference on Pattern Recognition, pp. 154 159 , (ISSN 1051-4651 ), doi: https://doi.org/10.1109/ICPR.2014.36 , 2014. Scientific article

A lower and more constrained estimate of climate sensitivity using updated observations and detailed radiative forcing time series Earth System Dynamics (ESD), vol. 5, pp. 139 175 , (ISSN 2190-4979 2190-4987 ), doi: https://doi.org/10.5194/esd-5-139-2014 , 2014. Scientific article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Geir Kjetil Sandve; Sveinung Gundersen; Morten Johansen; Ingrid Kristine Glad; Krishanthi Gunathasan; et al. The Genomic HyperBrowser: an analysis web server for genome-scale data Nucleic Acids Research (NAR), vol. 41, pp. W133 W141 , (ISSN 0305-1048 1362-4962 ), doi: https://doi.org/10.1093/nar/gkt342 , 2013. Scientific article

Publisher Oxford University Press

Identification of eight candidate target genes of the recurrent 3p12p14 loss in cervical cancer by integrative genomic profiling Journal of Pathology, vol. 230, pp. 59 69 , (ISSN 0022-3417 1096-9896 ), doi: https://doi.org/10.1002/path.4168 , 2013. Scientific article

Deep Sequencing the MicroRNA Transcriptome in Colorectal Cancer PLOS ONE, vol. 8, (ISSN 1932-6203 ), doi: https://doi.org/10.1371/journal.pone.0066165 , 2013. Scientific article

Publisher Norsk Regnesentral

Hypoxia-induced gene expression in chemoradioresistant cervical cancer revealed by dynamic contrast enhanced MRI Cancer Research, vol. 72, pp. 5285 5295 , (ISSN 0008-5472 1538-7445 ), doi: https://doi.org/10.1158/0008-5472.CAN-12-1085 , 2012. Scientific article

Using modelled historical concentrations of short lived climate components to constrain the climate sensitivity META, pp. 8 11 , (ISSN 1890-1956 1890-2987 ), 2012. Science for the public article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

The differential disease regulome BMC Genomics, vol. 12, pp. 353 353 , (ISSN 1471-2164 ), doi: https://doi.org/10.1186/1471-2164-12-353 , 2011. Scientific article

Molecular Disease Map of Bone Characterizing the Postmenopausal Osteoporosis Phenotype Journal of Bone and Mineral Research, vol. 26, pp. 1793 1801 , (ISSN 0884-0431 1523-4681 ), doi: https://doi.org/10.1002/jbmr.396 , 2011. Scientific article

Statistics Forelesning kurs 2011. Scientific lecture

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Eight genes are highly associated with BMD variation in postmenopausal Caucasian women Bone, vol. 46, pp. 604 612 , (ISSN 8756-3282 1873-2763 ), doi: https://doi.org/10.1016/j.bone.2009.11.007 , 2010. Scientific article

The Genomic HyperBrowser: inferential genomics at the sequence level Genome Biology, vol. 11, (ISSN 1465-6906 1474-760X ), doi: https://doi.org/10.1186/gb-2010-11-12-r121 , 2010. Scientific article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Adaptive registration of remote sensing images using supervised learning Photogrammetric Engineering and Remote Sensing, vol. 75, pp. 1297 1306 , (ISSN 0099-1112 ), , 2009. Scientific review article

ADAPTIVE INDEPENDENT METROPOLIS-HASTINGS The Annals of Applied Probability, vol. 19, pp. 395 413 , (ISSN 1050-5164 2168-8737 ), doi: https://doi.org/10.1214/08-AAP545 , 2009. Scientific article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Validation of oligoarrays for quantitative exploration of the transcriptome BMC Genomics, vol. 9, (ISSN 1471-2164 ), doi: https://doi.org/10.1186/1471-2164-9-258 , 2008. Scientific article

GSEA-SNP: applying gene set enrichment analysis to SNP data from genome-wide association studies Bioinformatics, vol. 24, pp. 2784 2785 , (ISSN 1367-4803 1367-4811 ), doi: https://doi.org/10.1093/bioinformatics/btn516 , 2008. Scientific article

Publisher Norsk Regnesentral

Cord blood gene expression in infants hospitalized with respiratory syncytial virus bronchiolitis Journal of Infectious Diseases, vol. 196, (ISSN 0022-1899 1537-6613 ), doi: https://doi.org/10.1086/519168 , 2007. Scientific article

Road Traffic Snapshot (ISSN 9788253905259 ), , 2007. Report

Publisher Norsk Regnesentral

Sampling effects on gene expression data from a human tumour xenograft Scandinavian Journal of Laboratory Animal Science, vol. 33, pp. 17 34 , (ISSN 0901-3393 ), 2006. Scientific article

Whole blood gene expression in infants with respiratory syncytial virus bronchiolitis BMC Infectious Diseases, vol. 6, (ISSN 1471-2334 ), doi: https://doi.org/10.1186/1471-2334-6-175 , 2006. Scientific article

Bioinformatikk-et tverrfaglig forskningsfelt Tilfeldig gang, (ISSN 0803-8953 0806-7406 ), 2006. Reader opinion

Steps in a microarray study 2006. Scientific lecture

Genome-wide estimation of transcript concentrations from spotted cDNA microarray data Nucleic Acids Research (NAR), vol. 33, (ISSN 0305-1048 1362-4962 ), doi: https://doi.org/10.1093/nar/gni141 , 2005. Scientific article

Limitations of mRNA amplification from small-size cell samples BMC Genomics, pp. 147 147 , (ISSN 1471-2164 ), doi: https://doi.org/10.1186/1471-2164-6-147 , 2005. Scientific article

Bayesian population dynamics of interacting species: Great gerbils and fleas in Kazakhstan Biometrics, vol. 61, (ISSN 0006-341X 1541-0420 ), 2005. Scientific article

Analysis of the humoral immune response to immunoselected phage-displayed peptides by a microarray-based method Proteomics, vol. 4, pp. 2572 2582 , (ISSN 1615-9853 1615-9861 ), 2004. Scientific article

Publisher Norsk Regnesentral

Introduksjon til analyse av cDNA mikromatrisedata Norsk Epidemiologi, pp. 132291 296 , (ISSN 0803-2491 1891-5477 ), 2003. Article journal

Comment on Cowling's "Spatial Methods for Line Transect Surveys" Biometrics, vol. 59, pp. 186 188 , (ISSN 0006-341X 1541-0420 ), 2003. Scientific article

Bildeanalyse av mikromatrisedata 2002. Scientific lecture

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Wet snow-cover mapping by C- and L-band polarimetric SAR Ukjent, pp. 1533 1537 , , 1998. Scientific article

Use of cut to obtain a characterization of the Kalmar elementary functions Technical Report Department of Informatics, 1997. Article journal

Examples of use of cut to shorten proofs Ukjent, 1997. Scientific article

A proof theoretic characterization of the Kalmar elementary functions Technical Report Department of Informatics, 1996. Article journal

Segmentation and visualization of brain lesions in multispectral magnetic resonance images Computerized Medical Imaging and Graphics, vol. 19, pp. 171 173 , (ISSN 0895-6111 1879-0771 ), 1995. Scientific article

Automatic recognition of character strings in maps Ukjent, 1995. Scientific article

Characterization of lesions in dynamical MRI using contrast agent and statistical analysis Ukjent, pp. 123 127 , 1994. Science for the public article

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Oppdatering av parameterestimater 1992. Scientific lecture

Publisher Norsk Regnesentral
Publisher Norsk Regnesentral
Publisher Norsk Regnesentral

Weak logic theory Theoretical Computer Science, vol. 79, pp. 295 321 , (ISSN 0304-3975 1879-2294 ), 1991. Scientific article

Weak logic theory Doctor Scient Thesis, 1988. Article journal

Theorem proving in classical logic applied within a logic for system specification Research Report, Department of Informatics, University of Oslo, 1986. Article journal