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Marit Holden

Chief Research Scientist

BAMJO

+47 22 85 26 77

marit@nr.no

Publications:

202 publications found

Publication

Year

Category

Utilizing earlier images in mammography cancer detection

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line

2023

Poster

Context-Aware Landmark Detection for 2D Cardiac Ultrasound using a Graph Convolution Network

Vedal, Amund Hansen; Eikvil, Line; Holden, Marit

2022

Poster

A mammography classification model trained from image labels only

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line

2022

Poster

Trajectories of gene expression, seasonal influenza, and within-host seasonal immunity: transfer value to covid-19

Eiliv, Lund; Holden, Marit; Igor, Snapkov; Lill-Tove Rasmussen, Busund; Nikita, Shvetsov; Holden, Lars

2022

Article journal

Learning motion of seismic structures without human labelling

Ordonez, Alba; Holden, Marit

2022

Rapport

Procedures for mammographic screening with machine learning

Eikvil, Line; Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Hofvind, Solveig; Aglen, Camilla Flåt; Larsen, Marthe

2022

Rapport

Machine learning for screening mammography

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line

2022

Rapport

A mammography classification model trained from image labels only

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line

2022

Vitenskapelig artikkel

A two-stage mammography classification model using XAI for ROI detection

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line

2022

Poster

Context-Aware Landmark Detection for 2D Cardiac Ultrasound using Graph Convnet

Vedal, Amund Hansen; Eikvil, Line; Holden, Marit; Gilbert, Andrew

2022

Vitenskapelig foredrag

Deep learning in seismic interpretation, Development and experiments 2021-2022

Eikvil, Line; Waldeland, Anders U.; Barker, Daniel Martin L; Holden, Marit; Hauge, Ragnar; Salberg, Arnt Børre

2022

Rapport

Machine learning for image-based interpretation of non-verbal communication – Initial version

Eikvil, Line; Holden, Marit; Ordonez, Alba

2021

Rapport

Machine learning for screening mammography

Eikvil, Line; Holden, Marit; Holden, Lars; Brautaset, Olav

2021

Rapport

Transcriptomic signals in blood prior to lung cancer focusing on time to diagnosis and metastasis

Nøst, Therese H.; Holden, Marit; Dønnem, Tom; Bøvelstad, Hege; Rylander, Charlotta; Lund, Eiliv; Sandanger, Torkjel M

2021

Vitenskapelig artikkel

Global blood gene expression profiles following a breast cancer diagnosis—Clinical follow-up in the NOWAC post-genome cohort

Olsen, Karina Standahl; Holden, Marit; Thalabard, Jean-Christophe; Busund, Lill-Tove Rasmussen; Lund, Eiliv; Holden, Lars

2021

Vitenskapelig artikkel

The blood transcriptome prior to ovarian cancer diagnosis: A case-control study in the NOWAC postgenome cohort

Jareid, Mie; Snapkov, Igor; Holden, Marit; Rasmussen Busund, Lill-Tove; Lund, Eiliv; Nøst, Therese Haugdahl

2021

Vitenskapelig artikkel

Learning motion of seismic structures without human labelling

Ordonez, Alba; Eikvil, Line; Holden, Marit

2021

Vitenskapelig foredrag

Machine learning for image-based interpretation of non-verbal communication

Eikvil, Line; Holden, Marit; Ordonez, Alba

2021

Rapport

Distinct subsets of noncoding RNAs are strongly associated with BMD and fracture, studied in weight-bearing and non-weight-bearing human bone

Gautvik, Kaare M; Günther, Clara-Cecilie; Prijatelj, Vid; Medina-Gomez, Carolina; Shevroja, Enisa; Rad, Leila Heidary; Yazdani, Mazyar; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Rivadeneira, Fernando; Utheim, Tor Paaske; Reppe, Sjur

2020

Vitenskapelig artikkel

Machine learning for screening mammography – Initial analyses on a first limited dataset

Eikvil, Line; Holden, Marit; Holden, Lars; Brautaset, Olav

2020

Rapport

User-Intended Doppler Measurement Type Prediction Combining CNNs With Smart Post-Processing

Gilbert, Andrew David; Holden, Marit; Eikvil, Line; Rakhmail, Mariia; Babic, Aleksandar; Aase, Svein Arne; Samset, Eigil; Mcleod, Kristin

2020

Vitenskapelig artikkel

Statistics of Sparsely Sampled Curves

Holden, Marit; Holden, Lars

2020

Vitenskapelig Kapittel/Artikkel/Konferanseartikkel

Signals of Death – Post-Diagnostic Single Gene Expression Trajectories in Breast Cancer – A Proof of Concept

Lund, Eiliv; Holden, Marit; Thalabard, Jean-Christophe; Rasmussen Busund, Lill-Tove; Snapkov, Igor; Holden, Lars

2020

Vitenskapelig Kapittel/Artikkel/Konferanseartikkel

Deep learning in seismic interpretations – Development and experiments 2020

Eikvil, Line; Waldeland, Anders U.; Barker, Daniel Martin L; Holden, Marit; Hauge, Ragnar; Salberg, Arnt Børre

2020

Rapport

9. Signals of Death—Post-Diagnostic Single Gene Expression Trajectories in Breast Cancer—A Proof of Concept

Lund, Eiliv; Holden, Marit; Thalabard, Jean-Christophe; Busund, Lill-Tove Rasmussen; Snapkow, Igor; Holden, Lars

2020

Vitenskapelig Kapittel/Artikkel/Konferanseartikkel

Maskinlæring i mammografiprogrammet

Eikvil, Line; Holden, Marit

2019

Lecture

Post-diagnostic blood gene expression profiles in breast cancer – NOWAC Post-genome Cohort

Olsen, Karina Standahl; Holden, Marit; Talabard, Jean-Christophe; Busund, Lill-Tove Rasmussen; Lund, Eiliv; Holden, Lars

2019

Poster

Automated Left Ventricle Dimension Measurement in 2D Cardiac Ultrasound via an Anatomically Meaningful CNN Approach

Gilbert, Andrew David; Holden, Marit; Eikvil, Line; Aase, Svein Arne; Samset, Eigil; Mcleod, Kristin

2019

Vitenskapelig artikkel

BLOBREC – a blood-based test for breast cancer Analyses of test properties in the years before and after diagnosis

Lund, Eiliv; Holden, Marit; Holden, Lars

2019

Rapport

Parity and breast cancer Gene expression in blood, normal and tumor tissue

Holden, Marit; Holden, Lars

2019

Rapport

Estimation of rock cuttings size from images

Eikvil, Line; Holden, Marit; Hauge, Ragnar; Kvernelv, Vegard Berg

2019

Rapport

Deep learning for ultrasound images – next steps

Eikvil, Line; Holden, Marit

2019

Rapport

Deep learning in seismic interpretation

Eikvil, Line; Waldeland, Anders U.; Holden, Marit; Salberg, Arnt Børre; Hauge, Ragnar; Barker, Daniel Martin L

2019

Rapport

Advising in a research institute: Challenges and lessons learned

Günther, Clara-Cecilie; Holden, Marit

2018

Lecture

Distinct subsets of non-coding RNAs, including miRNAs, are associated with BMD in stressed and unstressed bone

Gautvik, Kaare M; Günther, Clara-Cecilie; Yazdani, J.; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Utheim, Tor Paaske; Reppe, Sjur

2018

Poster

Transcriptional profiles of whole blood before a diagnosis of ovarian cancer

Jareid, Mie Linnea; Snapkov, Igor; Holden, Marit; Lund, Eiliv; Nøst, Therese Haugdahl

2018

Poster

Signalling pathways identified in salivary glands from primary Sjögren’s syndrome patients reveal enhanced adipose tissue development

Aqrawi, Lara Adnan; Jensen, Janicke Liaaen; Øijordsbakken, Gunnvor; Ruus, Ann-Kristin; Nygård, Ståle; Holden, Marit; Jonsson, Roland; Galtung, Hilde; Skarstein, Kathrine

2018

Vitenskapelig artikkel

Climate sensitivity estimates – Sensitivity to radiative forcing time series and observational data

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne Tommy; Holden, Marit; Myhre, Gunnar

2018

Vitenskapelig artikkel

Each pregnancy linearly changes immune gene expression in the blood of healthy women compared with breast cancer patients.

Lund, Eiliv; Nakamura, Aurelie; Snapkov, Igor; Thalabard, Jean-Christophe; Olsen, Karina Standahl; Holden, Lars; Holden, Marit

2018

Vitenskapelig artikkel

Distinct subsets of non-coding RNAs, including miRNAs, are associated with BMD in stressed and unstressed bone

Gautvik, Kaare M; Günther, Clara-Cecilie; Yazdani, J.; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Utheim, Tor Paaske; Reppe, Sjur

2018

Sammendrag/abstract

Parity and breast cancer – Gene expression in blood, normal and tumor tissue

Holden, Marit; Holden, Lars

2018

Rapport

Deep learning for ultrasound images

Eikvil, Line; Holden, Marit

2018

Rapport

Subtle alterations in gene expression detected in blood prior to metastatic lung cancer diagnosis – the NOWAC study

Nøst, Therese Haugdahl; Holden, Marit; Bøvelstad, Hege; Rylander, Charlotta; Lund, Eiliv; Sandanger, Torkjel M

2017

Lecture

GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome

Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman; Holden, Lars; Holden, Marit; Grytten, Ivar; Rand, Knut Dagestad; Drabløs, Finn ; Johansen, Morten; Mora Ortiz, Antonio Carlos; Lund-Andersen, Christin; Fromm, Bastian; Eskeland, Ragnhild; Gabrielsen, Odd Stokke; Ferkingstad, Egil; Nakken, Sigve; Bengtsen, Mads; Nederbragt, Alexander Johan; Thorarensen, Hildur Sif; Akse, Johannes Andreas; Glad, Ingrid Kristine; Hovig, Johannes Eivind; Sandve, Geir Kjetil

2017

Vitenskapelig artikkel

Local In Time Statistics for detecting weak gene expression signals in blood – illustrated for prediction of metastases in breast cancer in the NOWAC Post-genome Cohort

Holden, Marit; Holden, Lars; Olsen, Karina Standahl; Lund, Eiliv

2017

Vitenskapelig artikkel

Blood gene expression profiles reflect temporality and clinical parameters up to six years before breast cancer diagnosis – The Norwegian

Olsen, Karina Standahl; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra; Günther, Clara-Cecilie; Thalabard, Jean-Christophe; Holden, Marit; Lund, Eiliv

2016

Poster

Blood gene expression profiles reflect temporality and clinical parameters up to six years before breast cancer diagnosis – The Norwegian Women and Cancer Post-genome cohort (Kvinner og Kreft-studien)

Olsen, Karina Standahl; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra; Günther, Clara-Cecilie; Thalabard, Jean-Christophe; Holden, Marit; Lund, Eiliv

2016

Poster

A new statistical method for curve group analysis of longitudinal gene expression data illustrated for breast cancer in the NOWAC postgenome cohort as a proof of principle

Lund, Eiliv; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra Caroline; Mode, Nicolle; Günther, Clara-Cecilie; Nuel, Gregory; Thalabard, Jean-Christophe; Holden, Marit

2016

Vitenskapelig artikkel

The PBMC transcriptome profile after intake of oxidized versus high-quality fish oil: an explorative study in healthy subjects

Myhrstad, Mari; Ottestad, Inger; Günther, Clara-Cecilie; Ryeng, Einar; Holden, Marit; Nilsson, Astrid; Brønner, Kirsti Wettre; Kohler, Achim; Borge, Grethe Iren Andersen; Holven, Kirsten Bjørklund; Ulven, Stine Marie

2016

Vitenskapelig artikkel

Analysis of gene expression in blood before diagnosis of ovarian cancer – Different statistical methods

Holden, Marit; Holden, Lars

2016

Rapport

Parity, breast cancer and gene expression

Holden, Marit; Holden, Lars

2016

Rapport

Smoothing of forward curves

Løland, Anders; Holden, Marit

2016

Rapport

Detecting weak gene expression signals in blood before diagnosis of cancer – Comparing breast, ovarian and lung cancer

Holden, Marit; Holden, Lars

2016

Rapport

Fjerning av støy fra historiske dokumenter

Eikvil, Line; Holden, Marit

2016

Rapport

Statistical analysis of gene expression in blood before diagnosis of breast cancer

Holden, Marit; Holden, Lars

2016

Rapport

Multi-focus cluster labeling

Eikvil, Line; Jenssen, Tor-Kristian; Holden, Marit

2015

Vitenskapelig artikkel

Catechol-O-methyltransferase (COMT) gene polymorphisms are associated with baseline disability but not long-term treatment outcome in patients with chronic low back pain

Omair, Ahmad; Mannion, Anne F.; Holden, Marit; Fairbank, Jeremy; Lie, Benedicte Alexandra; Hägg, Olle; Fritzell, Peter; Brox, Jens Ivar

2015

Vitenskapelig artikkel

CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray

Lau, Corinna; Nygård, Ståle; Fure, Hilde; Olstad, Ole Kristoffer; Holden, Marit; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind; Mollnes, Tom Eirik

2015

Vitenskapelig artikkel

Age and pro-inflammatory gene polymorphisms influence adjacent segment disc degeneration more than fusion does in patients treated for chronic low back pain

Omair, Ahmad; Mannion, Anne F.; Holden, Marit; Leivseth, Gunnar; Fairbank, Jeremy; Hägg, Olle; Fritzell, Peter; Brox, Jens Ivar

2015

Vitenskapelig artikkel

Gene expression profiling of Gram-negative bacteria-induced inflammation in human whole blood: The role of complement and CD14-mediated innate immune response

Lau, Corinna; Olstad, Ole Kristoffer; Holden, Marit; Nygård, Ståle; Fure, Hilde; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind; Mollnes, Tom Eirik

2015

Vitenskapelig artikkel

Bruk av fargedeskriptorer for gjenkjenning av ukeblader

Eikvil, Line; Holden, Marit

2015

Rapport

Verification of a blood-based test for breast-cancer (BLOBREC) – Distinguishing breast-cancer patients from population-based controls

Holden, Marit; Günther, Clara-Cecilie; Holden, Lars

2015

Rapport

Curve groups and breast cancer

Lund, Eiliv; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra Caroline; Mode, Nicolle; Günther, Clara-Cecilie; Nuel, Gregory; Thalabard, Jean-Christophe; Holden, Marit

2015

Rapport

Blood-based diagnostic tests for breast cancer:Additional subgroup analyses of the BLOBREC test

Holden, Marit; Holden, Lars

2015

Rapport

Utvalg av deskriptorer for oppbygging av database

Eikvil, Line; Holden, Marit

2015

Rapport

Verifikasjon av strekkoder

Eikvil, Line; Holden, Marit

2015

Rapport

A statistical model of ChIA-PET data for accurate detection of chromatin 3D interactions

Paulsen, Jonas; Rødland, Einar Andreas; Holden, Lars; Holden, Marit; Hovig, Johannes Eivind

2014

Vitenskapelig artikkel

Fish oil supplementation induces Expression of genes related to cell cycle, endoplasmic reticulum stress and apoptosis in peripheral blood mononuclear cells: a transcriptomic approach

Myhrstad, Mari; Ulven, Stine Marie; Günther, Clara-Cecilie; Ottestad, Inger; Holden, Marit; Ryeng, Einar; Borge, Grethe Iren Andersen; Kohler, Achim; Brønner, Kirsti Wettre; Thoresen, Magne; Holven, Kirsten Bjørklund

2014

Vitenskapelig artikkel

Evaluation of Binary Descriptors for Fast and Fully Automatic Identification

Eikvil, Line; Holden, Marit

2014

Vitenskapelig artikkel

A lower and more constrained estimate of climate sensitivity using updated observations and detailed radiative forcing time series

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne Tommy; Holden, Marit; Myhre, Gunnar

2014

Vitenskapelig artikkel

Evaluation of binary descriptors for fast and fully automatic identification

Eikvil, Line; Holden, Marit

2014

Vitenskapelig foredrag

Historisk informasjon fra avisarkiv

Holden, Lars; Eikvil, Line; Holden, Marit; Boudko, Svetlana

2014

Rapport

Preprocessing of gene-expression data related to breast cancer diagnosis – extended version

Günther, Clara-Cecilie; Holden, Marit; Holden, Lars

2014

Rapport

Preprocessing of gene-expression data related to breast cancer diagnosis

Günther, Clara-Cecilie; Holden, Marit; Holden, Lars

2014

Rapport

Robust klassifikasjon av ukeblader

Eikvil, Line; Holden, Marit

2014

Rapport

Statistical analysis of gene expression data related to breast cancer diagnosis

Holden, Marit; Holden, Lars

2014

Rapport

The Genomic HyperBrowser: an analysis web server for genome-scale data

Sandve, Geir Kjetil; Gundersen, Sveinung; Johansen, Morten; Glad, Ingrid Kristine; Gunathasan, Krishanthi; Holden, Lars; Holden, Marit; Liestøl, Knut; Nygård, Ståle; Nygaard, Vegard; Paulsen, Jonas; Rydbeck, Halfdan; Trengereid, Kai; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Kalaš, Matúš; Lien, Tonje Gulbrandsen; Rye, Morten Beck; Frigessi, Arnoldo; Hovig, Johannes Eivind

2013

Vitenskapelig artikkel

Identification of eight candidate target genes of the recurrent 3p12p14 loss in cervical cancer by integrative genomic profiling

Lando, Malin; Wilting, Saskia M.; Snipstad, Kristin; Clancy, Trevor; Bierkens, Mariska; Aarnes, Eva-Katrine; Holden, Marit; Stokke, Trond; Sundfør, Kolbein; Holm, Ruth; Kristensen, Gunnar S Balle; Steenbergen, Renske D.M.; Lyng, Heidi

2013

Vitenskapelig artikkel

Treatment outcome of chronic low back pain and radiographic lumbar disc degeneration are associated with inflammatory and matrix degrading gene variants: a prospective genetic association study

Omair, Ahmad; Holden, Marit; Lie, Benedicte Alexandra; Reikerås, Olav; Brox, Jens Ivar

2013

Vitenskapelig artikkel

Deep Sequencing the MicroRNA Transcriptome in Colorectal Cancer

Schee, Kristina; Lorenz, Susanne; Worren, Merete Molton; Günther, Clara-Cecilie; Holden, Marit; Hovig, Johannes Eivind; Fodstad, Øystein; Meza, Leonardo Zepeda; Flatmark, Kjersti

2013

Vitenskapelig artikkel

Descriptors and matching for real-time recognition of planar and curved objects

Eikvil, Line; Holden, Marit

2013

Rapport

Metoder og programmer for gjenkjenning av ukeblader

Eikvil, Line; Holden, Marit

2013

Rapport

Constraining climate sensitivity by observations and models

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne; Holden, Marit; Myhre, Gunnar

2012

Poster

Stress associated gene expression in blood cells is related to outcome in radiotherapy treated head and neck cancer patients

Bøhn, Siv Kjølsrud; Russnes, Kjell Magne; Sakhi, Amrit Kaur; Thoresen, Magne; Holden, Marit; Moskaug, Jan Øivind; Myhrstad, Mari Charlotte; Olstad, Ole Kristoffer; Smeland, Sigbjørn; Blomhoff, Rune

2012

Vitenskapelig artikkel

Genetic contribution of catechol-O-methyltransferase variants in treatment outcome of low back pain: a prospective genetic association study

Omair, Ahmad; Lie, Benedicte Alexandra; Reikerås, Olav; Holden, Marit; Brox, Jens Ivar

2012

Vitenskapelig artikkel

Bayesian estimation of climate sensitivity based on a simple climate model fitted to observations of hemispheric temperatures and global ocean heat content

Aldrin, Magne; Holden, Marit; Guttorp, Peter; Skeie, Ragnhild Bieltvedt; Myhre, Gunnar; Berntsen, Terje Koren

2012

Vitenskapelig artikkel

Hypoxia-induced gene expression in chemoradioresistant cervical cancer revealed by dynamic contrast enhanced MRI

Halle, Cathinka Lønning; Andersen, Erlend K F; Lando, Malin; Aarnes, Eva-Katrine; Hasvold, Grete; Holden, Marit; Syljuåsen, Randi G.; Sundfør, Kolbein; Kristensen, Gunnar S Balle; Holm, Ruth; Malinen, Eirik; Lyng, Heidi

2012

Vitenskapelig artikkel

Using modelled historical concentrations of short lived climate components to constrain the climate sensitivity

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne; Holden, Marit

2012

Populærvitenskapelig artikkel

Importance Sampling from DNB’s Credit Risk Model

Aas, Kjersti; Holden, Marit

2012

Rapport

Detecting beads in time series of DNA-sequencing images

Holden, Marit; Eikvil, Line

2012

Rapport

Image restoration and analysis of biomolecular radioactivity images II

Holden, Marit; Glad, Ingrid Kristine; Hauge, Håvard Hildeng; Hovig, Eivind; Liestøl, Knut

2012

Rapport

Detectors and descriptors for real-time recognition of planar objects

Eikvil, Line; Holden, Marit

2012

Rapport

ProPrice Interface Specification

Løland, Anders; Holden, Marit

2012

Rapport

The differential disease regulome

Sandve, Geir Kjetil; Gundersen, Sveinung; Rydbeck, Halfdan; Glad, Ingrid Kristine; Holden, Lars; Holden, Marit; Liestøl, Knut; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Johansen, Morten; Nygaard, Vegard; Tøstesen, Eivind; Frigessi, Arnoldo; Hovig, Eivind

2011

Vitenskapelig artikkel

Membranous Expression of Ectodomain Isoforms of the Epidermal Growth Factor Receptor Predicts Outcome after Chemoradiotherapy of Lymph Node-Negative Cervical Cancer

Halle, Cathinka Lønning; Lando, Malin; Svendsrud, Debbie Hege; Clancy, Trevor; Holden, Marit; Sundfør, Kolbein; Kristensen, Gunnar S Balle; Holm, Ruth; Lyng, Heidi

2011

Vitenskapelig artikkel

Molecular Disease Map of Bone Characterizing the Postmenopausal Osteoporosis Phenotype

Jemtland, Rune; Holden, Marit; Reppe, Sjur; Olstad, Ole Kristoffer; Reinholt, Finn P.; Gautvik, Vigdis Teig; Refvem, Hilde; Frigessi, Arnoldo; Houston, Brian; Gautvik, Kaare M

2011

Vitenskapelig artikkel

Statistics Forelesning kurs

Günther, Clara-Cecilie; Tvete, Ingunn Fride; Holden, Marit

2011

Vitenskapelig foredrag

Parallellisering av Totalrisiko-programmet ved hjelp av GPU

Holden, Marit; Aas, Kjersti

2011

Rapport

Parallellisering av simulering fra vines

Holden, Marit; Aas, Kjersti

2011

Rapport

Efficient search for biomedical information

Eikvil, Line; Holden, Marit

2011

Rapport

Bildeanalyse av røntgenbilder til hjelp for aldersvurdering

Kvaal, Sigrid Ingeborg; Eikvil, Line; Holden, Marit

2011

Rapport

Eight genes are highly associated with BMD variation in postmenopausal Caucasian women

Reppe, S; Refvem, Hilde; Gautvik, VT; Olstad, OK; Høvring, Per Ivar; Reinholt, Finn P.; Holden, Marit; Frigessi, Arnoldo; Jemtland, R; Gautvik, KM

2010

Vitenskapelig artikkel

The Genomic HyperBrowser: inferential genomics at the sequence level

Sandve, Geir Kjetil; Gundersen, Sveinung; Rydbeck, Halfdan; Glad, Ingrid Kristine; Holden, Lars; Holden, Marit; Liestøl, Knut; Clancy, Trevor; Ferkingstad, Egil; Johansen, Morten; Nygaard, Vegard; Tøstesen, Eivind; Frigessi, Arnoldo; Hovig, Eivind

2010

Vitenskapelig artikkel

Blood cell gene expression associated with cellular stress defense is modulated by antioxidant-rich food in a randomised controlled clinical trial of male smokers

Bøhn, Siv Kjølsrud; Myhrstad, Mari Charlotte; Thoresen, Magne; Holden, Marit; Karlsen, Anette; Tunheim, Siv Haugen; Erlund, Iris; Svendsen, Mette; Seljeflot, Ingebjørg; Moskaug, Jan Øivind; Duttaroy, Asim K.; Laake, Petter; Arnesen, Harald; Tonstad, Serena; Collins, Andrew Richard; Drevon, Christian A; Blomhoff, Rune

2010

Vitenskapelig artikkel

Postmenopausal BMD Variation is Strongly Associated with Subsets of MicroRNAs and Other Non-coding RNAs (ncRNAs) Expression Levels

Reppe, Sjur; Holden, Marit; Gautvik, Vigdis; Datta, Harish K; Gautvik, Kaare M

2010

Vitenskapelig foredrag

Bayesian estimation of the climate sensitivity based on a simple climate model fitted to global temperature observations

Aldrin, Magne; Holden, Marit; Guttorp, Peter

2010

Vitenskapelig foredrag

Parallellisering av Totalrisiko-programmet

Holden, Marit; Aas, Kjersti

2010

Rapport

Parallellisering av Kredittrisiko-programmet

Holden, Marit; Aas, Kjersti

2010

Rapport

Eight Genes are Highly Associated with BMD variation in Postmenopausal Caucasian Women

Reppe, Sjur; Refvem, Hilde; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Høvring, Per Ivar; Reinholt, Finn P.; Holden, Marit; Frigessi, Arnoldo; Jemtland, Rune; Gautvik, Kaare M

2009

Poster

Adaptive registration of remote sensing images using supervised learning

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang

2009

Vitenskapelig oversiktsartikkel/review

ADAPTIVE INDEPENDENT METROPOLIS-HASTINGS

Holden, Lars; Hauge, Ragnar; Holden, Marit

2009

Vitenskapelig artikkel

Gene Dosage, Expression, and Ontology Analysis Identifies Driver Genes in the Carcinogenesis and Chemoradioresistance of Cervical Cancer

Lando, M; Holden, Marit; Bergersen, LC; Glad, Ingrid K; Kristensen, GB; Lyng, H; Svendsrud, Debbie H.; Stokke, Trond; Sundfør, Kolbein

2009

Vitenskapelig artikkel

A system for adaptive image registration based on supervised learning

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang

2009

Vitenskapelig foredrag

Introductory microarray course; statistics

Tvete, Ingunn Fride; Holden, Marit

2009

Lecture popular

MIR – Multiple Image Registration, Technical Documentation

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang

2009

Rapport

MIR – Multiple Image Registration, Software Documentation

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang

2009

Rapport

Validation of oligoarrays for quantitative exploration of the transcriptome

Nygaard, V; Liu, Fang; Holden, Marit; Kuo, Winston P.; Trimarchi, Jeff; Ohno-Machado, Lucila; Cepko, Connie L.; Frigessi, Arnoldo; Glad, Ingrid K.; Wiel, Mark A. van de; Hovig, Eivind; Lyng, H

2008

Vitenskapelig artikkel

GSEA-SNP: applying gene set enrichment analysis to SNP data from genome-wide association studies

Holden, Marit; Deng, Shiwei; Wojnowski, Leszek; Kulle, Bettina

2008

Vitenskapelig artikkel

Plant food phytochemicals modulate gene expression in human blood cells

Bøhn, Siv Kjølsrud; Myhrstad, Mari Charlotte; Thoresen, Magne; Holden, Marit; Tunheim, Siv Haugen; Karlsen, Anette; Svendsen, Mette; Seljeflot, Ingebjørg; Moskaug, Jan Øivind; Duttaroy, Asim K.; Laake, Petter; Drevon, Christian A; Arnesen, Harald; Tonstad, Serena; Collins, Andrew Richard; Blomhoff, Rune

2008

Vitenskapelig foredrag

Vehicle Detection in High-Resolution Satellite Images

Eikvil, Line; Koren, Hans; Holden, Marit

2008

Vitenskapelig foredrag

Adaptive Co-Registration of Remote Sensing Images

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang

2008

Vitenskapelig foredrag

Introductory microarray course; statistics

Tvete, Ingunn Fride; Holden, Marit

2008

Lecture popular

CultSearcher – Software Guide, version 2. Computer-assisted detection of potential cultural heritage sites

Amlien, Jostein; Holden, Marit; Larsen, Siri Øyen; Trier, Øivind Thorvald Due; Solberg, Rune

2008

Rapport

Image restoration and analysis of biomolecular radioactivity images

Holden, Marit; Glad, Ingrid Kristine; Hauge, Håvard Lilledalen; Liestøl, Knut

2008

Rapport

Cord blood gene expression in infants hospitalized with respiratory syncytial virus bronchiolitis

Fjærli, Hans Olav; Bukholm, G; Skjæret, Camilla; Holden, Marit; Nakstad, B

2007

Vitenskapelig artikkel

CultSearcher – Computer-assisted detection of potential cultural heritage sites

Amlien, Jostein; Holden, Marit; Larsen, Siri Øyen; Solberg, Rune

2007

Rapport

Road Traffic Snapshot

Aurdal, Lars; Eikvil, Line; Koren, Hans; Hanssen, Jan Usterud; Johansen, Kjell; Holden, Marit

2007

Rapport

Sampling effects on gene expression data from a human tumour xenograft

Berner, Jeanne-Marie; Muller, Christoph Rainer; Holden, Marit; Wang, Junbai; Hovig, Eivind; Myklebost, Ola

2006

Vitenskapelig artikkel

Whole blood gene expression in infants with respiratory syncytial virus bronchiolitis

Fjærli, Hans Olav; Bukholm, Geir; Krog, Anne; Skjæret, Camilla; Holden, Marit; Nakstad, B

2006

Vitenskapelig artikkel

Bioinformatikk-et tverrfaglig forskningsfelt

Holden, Marit

2006

Reader opinion

Bayesian process-based modeling of two-channel microarray experiments estimating absolute mRNA concentrations

van de Wiel, Mark; Holden, Marit; Glad, Ingrid Kristine; Lyng, Heidi; Frigessi, Arnoldo

2006

Vitenskapelig Kapittel/Artikkel/Konferanseartikkel

Parallelization of TransCount – making MCMC parallel for huge datasets

Holden, Marit

2006

Vitenskapelig foredrag

Steps in a microarray study

Holden, Marit

2006

Vitenskapelig foredrag

Finding differentially expressed genes from microarray data

Holden, Marit; Haug, Ola; Frigessi, Arnoldo

2006

Lecture popular

Absolute mRNA concentrations from MA-data

Frigessi, Arnoldo; Wiel, Mark A. van de; Holden, Marit; Svendsrud, Debbie H.; Glad, Ingrid K.; Lyng, Heidi

2005

Poster

Genome-wide estimation of transcript concentrations from spotted cDNA microarray data

Frigessi, Arnoldo; van de Wiel, Mark; Holden, Marit; Svendsrud, Debbie H.; Glad, Ingrid Kristine; Lyng, Heidi

2005

Vitenskapelig artikkel

Limitations of mRNA amplification from small-size cell samples

Nygaard, Vigdis; Holden, Marit; Løland, Anders; Langaas, Mette; Myklebost, Ola; Hovig, Eivind

2005

Vitenskapelig artikkel

Bayesian population dynamics of interacting species: Great gerbils and fleas in Kazakhstan

Frigessi, Arnoldo; Holden, Marit; Marshall, Clare; Viljugrein, Hildegunn; Stenseth, Nils Christian; Holden, Lars; Ageyev, V; Klassovskiy, NL; Ageyev, Vladimir; Klassovskiy, Nikolay

2005

Vitenskapelig artikkel

Model-based estimation of transcript concentrations from spotted microarray data

Holden, Marit

2005

Vitenskapelig foredrag

Logic regression used for statistical analysis of SNP data obtained in genetic association studies

Holden, Marit

2005

Vitenskapelig foredrag

Experimental design and non-random variation

Holden, Marit

2005

Vitenskapelig foredrag

Funksjonell genomforskning, bioinformatikk og statistikk

Holden, Marit

2005

Lecture popular

Statistics and Bioinformatics

Holden, Marit; Løland, Anders; Neef, Linda Reiersølmoen; Haug, Ola; Frigessi, Arnoldo

2005

Lecture popular

Analysis of the humoral immune response to immunoselected phage-displayed peptides by a microarray-based method

Haug, O; Myklebost, Ola; Aldrin, M; Østenstad, Bjørn; Holden, M; Frigessi, Arnoldo; Sioud, Mouldy; Cekaite, Lina; Hovig, Eivind

2004

Vitenskapelig artikkel

Introduction to experimental design and statistical analysis in genetic association studies

Holden, Marit

2004

Vitenskapelig foredrag

Experimental design and non-random variation

Holden, Marit

2004

Vitenskapelig foredrag

Experimental design, repeated measurements and control spots

Holden, Marit

2004

Vitenskapelig foredrag

Course in statistics for molecular biologists

Holden, Marit

2004

Lecture popular

glme: a C-program for parameter estimation using Gibbs-sampling in large linear mixed-effects models, with applications to DNA microarray data

Follestad, Turid; Langaas, Mette; Rue, Håvard; Holden, Marit; Løland, Anders

2004

Rapport

Model-based estimation of transcript concentrations from spotted microarray data

Frigessi, Arnoldo; Van der Wiel, Mark; Holden, Marit; Glad, Ingrid Kristine; Lyng, Heidi; Wiel, Mark A. van de; Glad, Ingrid K.

2004

Rapport

Introduksjon til analyse av cDNA mikromatrisedata

Holden, Marit; Løland, Anders

2003

Article journal

Comment on Cowling’s “Spatial Methods for Line Transect Surveys”

Aldrin, Magne; Holden, Marit; Schweder, Tore

2003

Vitenskapelig artikkel

Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance

Nygaard, Vigdis; Løland, Anders; Holden, Marit; Langaas, Mette; Rue, Håvard; Liu, Fang; Myklebost, Ola; Fodstad, Øystein; Hovig, Eivind; Smith-Sørensen, Birgitte

2003

Vitenskapelig artikkel

Estimation of absolute mRNA concentrations from cDNA microarrays

Holden, Marit

2003

Vitenskapelig foredrag

Experimental design, repeated measurements and control spots

Holden, Marit

2003

Vitenskapelig foredrag

Experimental design, repeated measurements and controls

Holden, Marit

2003

Vitenskapelig foredrag

Forsøksdesign for cDNA mikromatriser. Foredrag

Holden, Marit

2003

Vitenskapelig foredrag

Experimental design and statistical analysis of SNP data obtained in genetic association studies

Holden, Marit; Haug, Ola

2003

Rapport

A Bayesian model for the population dynamics of two interacting species, with application to great gerbils and fleas in south-eastern Kazakhstan

Marshall, Clare; Frigessi, Arnoldo; Holden, Marit; Viljugrein, Hildegunn; Stenseth, Nils Christian; Holden, Lars; Ageyev, Vladimir; Klassovskiy, Nikolay

2003

Rapport

Spatial distribution of whales based on the Norwegian Minke Whale Survey 1996-2001

Aldrin, Magne; Schweder, Tore; Holden, Marit

2002

Article journal

Bildeanalyse av mikromatrisedata

Holden, Marit

2002

Vitenskapelig foredrag

Investigating the linearity of an RNA-amplification protocol using analysis of variance on data from cDNA microarray experiments

Holden, Marit; Løland, Anders; Langaas, Mette; Rue, Håvard; Nygaard, Vigdis; Myklebost, Ola; Hovig, Eivind

2002

Vitenskapelig foredrag

Klustring av mikromatrisedata

Holden, Marit

2002

Lecture popular

Estimation of a Neyman-Scott process from line transect data by a one-dimensional K-function

Aldrin, Magne; Holden, Marit; Schweder, Tore

2001

Rapport

A new method for sub-pixel snow-cover mapping using hyperspectral imagery

Solberg, Rune; Holden, Marit

2000

Vitenskapelig foredrag

SnowStar – Brukerveiledning for SnowStar Server

Holden, Marit; Solberg, Rune

2000

Rapport

Locating pipes in cross-profiles – documentation of methods and results

Huseby, Ragnar Bang; Holden, Marit

2000

Rapport

Plague in Kazakhstan: a bayesian model for the temporal dynamics of a vector-transmitted infectious disease

Marshall, Clare; Frigessi, Arnoldo; Stenseth, Nils Christian; Holden, Marit; Ageyev, Vladimir; Klassovskiy, Nikolay

2000

Rapport

SnowStar – Teknisk dokumentasjon for SnowStar Server

Holden, Marit; Solberg, Rune

2000

Rapport

Locating pipes in cross-profiles – documentation of C++ code

Huseby, Ragnar Bang; Holden, Marit

2000

Rapport

Seismic Attribute Analysis, Part IV

Eikvil, Line; Holden, Marit; Solberg, Anne H. Schistad

1999

Rapport

Wet snow-cover mapping by C- and L-band polarimetric SAR

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune

1998

Vitenskapelig artikkel

Wet snow-cover mapping by C- and L-band polarimtric SAR

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune

1998

Vitenskapelig artikkel

Segmentation and Visualization of Brain Lesions in Multispectral Magnetic Resonance Images

Holden, Marit

1998

Vitenskapelig foredrag

Snow mapping by multifrequency polarimetric SAR – An investigation of EMISAR data from the EMAC’95 snow campaign in Norway

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune

1998

Rapport

Seismic image analysis: 3D texture attributes and classification – part III

Solberg, Anne H. Schistad; Holden, Marit; Storvik, Geir; Teigland, André; Møller-Holst, Johan

1998

Rapport

Use of cut to obtain a characterization of the Kalmar elementary functions

Holden, Marit

1997

Article journal

Examples of use of cut to shorten proofs

Holden, Marit

1997

Vitenskapelig artikkel

Seismic image analysis: 3D texture attributes and classification – part II

Holden, Marit; Solberg, Anne H. Schistad; Storvik, Geir; Teigland, André; Møller-Holst, Johan; Berge, Anker M.

1997

Rapport

A proof theoretic characterization of the Kalmar elementary functions

Holden, Marit

1996

Article journal

Segmentation and visualization of brain lesions in multispectral magnetic resonance images

Holden, Marit; Steen, Erik; Lundervold, Arvid

1995

Vitenskapelig artikkel

Automatic recognition of character strings in maps

Eikvil, Line; Aas, Kjersti; Holden, Marit

1995

Vitenskapelig artikkel

Characterization of lesions in dynamical MRI using contrast agent and statistical analysis

Aas, Kjersti; Holden, Marit

1994

Populærvitenskapelig artikkel

Segmentation of MR images of the head using a hierarchical method

Holden, Marit

1994

Rapport

Automatic interpretation of incoming mail in administrative environments

Holden, Marit; Maartmann-Moe, Erling

1994

Rapport

Methods for updating of model parameters applied within the area of symbol recognition

Holden, Marit; Eikvil, Line; Storvik, Geir

1993

Vitenskapelig artikkel

Methods for updating of model parameters applied within the area of symbol recognition

Holden, Marit; Eikvil, Line; Storvik, Geir Olve

1993

Vitenskapelig foredrag

Segmentation and visualization of brain lesions in multispectral magnetic resonance images

Holden, Marit; Steen, Erik; Lundervold, Arvid

1993

Rapport

Assessment of tissue perfusion and characterization of lesions in dynamical MRI using contrast agents and statistical analysis – methodological considerations and clinical applications

Holden, Marit; Aas, Kjersti; Lundervold, Arvid; Milvang, Otto; Storvik, Geir; Sebastini, Giovanni; Godtlibsen, Fred; Kristoffersen, Doris Tove

1993

Rapport

Theory and methods for automatic training and updating

Holden, Marit; Koren, Hans

1993

Rapport

Image acquisition and pre-processing methods for machine vision sensors

Dahle, Øivind; Holden, Marit

1993

Rapport

Diagnostic evaluation of contrast agents in medical imaging – proposals towards quantitative assessment

Storvik, Geir; Lundervold, Arvid; Holden, Marit; Farrants, George

1993

Rapport

Oppdatering av parameterestimater

Holden, Marit

1992

Vitenskapelig foredrag

Methods for updating of model parameters applied within the area of symbol recognition

Eikvil, Line; Holden, Marit; Storvik, Geir Olve

1992

Rapport

Multispectral analysis and classification system (cxxmacs): Users manual

Bosnes, Vidar; Holden, Marit; Storvik, Geir Olve; Bosnes, Vidar

1992

Rapport

Improving statistical image classification by updating model parameters using unclassified pixels

Storvik, Geir Olve; Bosnes, Vidar; Holden, Marit; Bosnes, Vidar

1992

Rapport

An evaluation of statistical modeling in magnetic resonance imaging using images fron the central nervous system aquired with and without a Gladolium-based contrast medium

Bosnes, Vidar; Blomlie, Viggo; Hald, John Kløve; Holden, Marit; Høgåsen, Gutorm Thomas; Lundervold, Arvid; Milvang, Otto; Storvik, Geir Olve; Øksendal, Anders; Aas, Kjersti

1992

Rapport

Analysis of frequency information in echocardiographic radio-frequency data acquired in the presence or absance of a contrast agent (Albunex)

Holden, Marit; Milvang, Otto; Aas, Kjersti

1992

Rapport

Weak logic theory

Holden, Marit

1991

Vitenskapelig artikkel

Weak logic theory

Holden, Marit

1988

Article journal

Theorem proving in classical logic applied within a logic for system specification

Holden, Marit

1986

Article journal

Bevisføring i klassisk logikk anvendt innenfor en logikk for systemspesifikasjon

Holden, Marit

1985

Article journal

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